Of course, if the radiation dose had been much higher over those 50,000 years, the rate of genetic drift would have been consequently higher, and speciation may well have occured.
Anyway, there's always the possibility of raciation, something that standard fantasy has as a rule - different races, but they can all reproduce with each other. I believe Homo Sapiens was already on the way to doing so...
Different supspecies, still capable of reproduction with each other, would go by the name... Homo Sapiens [insert extra name here]? Going with the Aspie thread, that subspecies would be Homo Sapiens Aspie?
And the stereotypical dwarves Homo Sapiens Dwarfus, and goblins Homo Sapiens Goblinus...